Search results

Incorporating quality scores for ASE counts

Status: Open.

#18 In TheFraserLab/ASEr;

· rmagoglia opened on Nov 10, 2016

Reads dropped during ASE calling?

Status: Open.

#17 In TheFraserLab/ASEr;

· rmagoglia opened on Jul 20, 2016

Skipping of Indels in CountSNPASE

Status: Open.

#15 In TheFraserLab/ASEr;

· petercombs opened on Jun 20, 2016

Make sure we throw out chimeric reads

Status: Open.

#14 In TheFraserLab/ASEr;

· petercombs opened on May 9, 2016

Fetch over entire genes...

Status: Open.

#13 In TheFraserLab/ASEr;

· carloartieri opened on Apr 3, 2016

Add summary of algorithm to README.rst

enhancement

Status: Open.

#8 In TheFraserLab/ASEr;

· MikeDacre opened on Mar 23, 2016

Allow use of GFF/GTF/VCF files instead of bed files.

enhancement

Status: Open.

#7 In TheFraserLab/ASEr;

· MikeDacre opened on Mar 23, 2016

Change input/output tables to be handled by pandas

enhancement

Status: Open.

#4 In TheFraserLab/ASEr;

· MikeDacre opened on Mar 22, 2016

Alter code to use pysam's bam indexing to speed up parsing.

enhancement

Status: Open.

#2 In TheFraserLab/ASEr;

· MikeDacre opened on Mar 22, 2016