Add FHIR sources and LLM config to healthchain.yaml#196
Merged
jenniferjiangkells merged 12 commits intomainfrom Mar 30, 2026
Merged
Add FHIR sources and LLM config to healthchain.yaml#196jenniferjiangkells merged 12 commits intomainfrom
jenniferjiangkells merged 12 commits intomainfrom
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…to feat/cli-fixes
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Description
Extends the app config schema and CLI scaffolding to support declaring FHIR data sources and LLM providers directly in
healthchain.yaml, reducing boilerplate in user app code.Changes:
AppConfig: addsSourceConfig(FHIR source with env-prefix-based credential loading) andLLMConfig(provider/model/max_tokens with to_langchain() helper)healthchain.yamltemplate: adds commented-out sources and llm sections so new projects see the config shape immediatelycli.py: scaffold template updated to R4B imports; sandbox run resolvesfrom_pathfromconfig data.patients_dirif not passed explicitlyapp.pygateway template: minor fix