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new(mafft.cbrc.jp): mafft 7.525#13423

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jhheider merged 2 commits into
pkgxdev:mainfrom
tannevaled:new/mafft
Jun 20, 2026
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new(mafft.cbrc.jp): mafft 7.525#13423
jhheider merged 2 commits into
pkgxdev:mainfrom
tannevaled:new/mafft

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Adds MAFFT — multiple sequence alignment. Uses the without-extensions source (pure C, no Go/Ruby/Perl build deps). The mafft wrapper bakes PREFIX/libexec/mafft as MAFFT_BINARIES at compile time, so PREFIX is set on both make and make install; verified on linux/arm64 that the installed wrapper runs from the final prefix with MAFFT_BINARIES unset and the build dir off PATH (aligns a 3-seq fixture, rc=0). The versions: stanza scrapes the upstream source page (which keeps only ~2 versions live), resolving 7.525.

@tannevaled tannevaled force-pushed the new/mafft branch 2 times, most recently from 1935d9d to 2a3c6f3 Compare June 19, 2026 14:33
Multiple sequence alignment (C). without-extensions src; PREFIX baked at compile time into the wrapper.
@jhheider jhheider merged commit 6d40dcf into pkgxdev:main Jun 20, 2026
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2 participants