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new(microbesonline.org/fasttree): fasttree 2.2.0#13428

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jhheider merged 2 commits into
pkgxdev:mainfrom
tannevaled:new/fasttree
Jun 20, 2026
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new(microbesonline.org/fasttree): fasttree 2.2.0#13428
jhheider merged 2 commits into
pkgxdev:mainfrom
tannevaled:new/fasttree

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Adds FastTree — approximately-maximum-likelihood phylogenetic trees from large sequence alignments. Single C source file compiled with cc -O3 -finline-functions -funroll-loops -lm (no Makefile). Sourced from the morgannprice/fasttree GitHub mirror (tagged v2.2.0, contains FastTree.c), homepage-keyed at microbesonline.org. Verified end-to-end on linux/arm64: builds with system cc, prints FastTree Version 2.2.0, and infers a Newick tree from a 4-sequence fixture.

Approximately-ML phylogenetic trees (single-file C). cc -O3, install -Dm0755.
@jhheider jhheider merged commit cf3779e into pkgxdev:main Jun 20, 2026
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