new(github.com/vcftools/vcftools): vcftools 0.1.17#13430
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VCF toolkit (C++ vcftools + perl vcf-* scripts). release tarball, --with-pmdir + PERL5LIB.
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Adds VCFtools — the classic VCF variant-call toolkit (
vcftoolsC++ binary + ~20vcf-*/fill-*perl helpers), rounding out the bcftools/samtools/bwa/seqtk/minimap2 bioinfo set. Built from the GitHub release tarball (shipsconfigure, no autogen). The perl helpersuse Vcf, soperl.orgis a runtime dep and--with-pmdir=share/perl5pins a perl-version-stable module path matched byruntime.env PERL5LIB=${{prefix}}/share/perl5(the default would couple the layout to the build perl's version). C++ -> gcc14/libstdcxx on linux. Verified end-to-end on linux/arm64:vcftoolsbanner0.1.17,--freqon a fixture VCF yieldsA:0.75, andvcf-merge -hresolvesVcf.pmvia PERL5LIB.